PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR06G07490.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family TCP
Protein Properties Length: 409aa    MW: 41159.2 Da    PI: 9.8125
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR06G07490.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.92.5e-40612452134
              TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...... 88 
                      ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +      
  LPERR06G07490.1  61 PAKRTSTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSFPshlrla 154
                      789******************************************************************9998777777777755555677788 PP

              TCP  89 ..........................................kaaksaakskksqksaasalnlakesr......akarar...arertrekmr 131
                                                                +  +s+ +   s +s +  l+++ + +      a        +r+r  e + 
  LPERR06G07490.1 155 glaggghrfgvggggarsaadawdrvvglgfgggeqapssatS--SSSSPLLLSFHSGSVGLDVSPSPSpaastsA----AadlSRKRRWEHQE 242
                      8888888888888888888899999999999888888876431..2222444455555544555553333333221....12233333333333 PP

              TCP 132 ikn 134
                      +++
  LPERR06G07490.1 243 MQQ 245
                      333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.4E-4265248IPR005333Transcription factor, TCP
PROSITE profilePS5136927.67567121IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MDVTGDAGGG RRPNFPLQLL GKKEEQPCST SQLSAGGANG SAAPGELQQA RATTKAAAPA  60
PAKRTSTKDR HTKVDGRGRR IRMPAICAAR VFQLTRELGH KTDGETIEWL LQQAEPAVIA  120
ATGTGTIPAN FTSLNISLRS SGSSLSFPSH LRLAGLAGGG HRFGVGGGGA RSAADAWDRV  180
VGLGFGGGEQ APSSATSSSS SPLLLSFHSG SVGLDVSPSP SPAASTSAAA DLSRKRRWEH  240
QEMQQQQQYQ QQMAGYTQSQ IPAGTVWMVP SSQAGGGAPI PGGGAGAGES VWTFPQSGSG  300
GGGGGATAVY RGVPSGLHFM NFPAAPMALL PGGHQLGLGG GGGDGQSGNI LAALNAYRAQ  360
AAQADGAGAP GQNNGAQGSN RHHQHQQHGG GGAGDGDDRR HESMNASDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006655935.11e-145PREDICTED: transcription factor TCP14-like
SwissprotQ93Z009e-51TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A0D9WNJ30.0A0A0D9WNJ3_9ORYZ; Uncharacterized protein
STRINGOB06G17670.11e-145(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-40TCP family protein